Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg5Q71M36 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg5Q71M36 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.75■□□□□ 0.75
Cspg5Q71M36 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg5Q71M36 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cspg5Q71M36 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cspg5Q71M36 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.74■□□□□ 0.75
Cspg5Q71M36 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.74■□□□□ 0.75
Cspg5Q71M36 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cspg5Q71M36 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.74■□□□□ 0.75
Cspg5Q71M36 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cspg5Q71M36 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cspg5Q71M36 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cspg5Q71M36 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cspg5Q71M36 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg5Q71M36 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.72■□□□□ 0.75
Cspg5Q71M36 Gm5408-201ENSMUST00000197998 747 ntBASIC19.72■□□□□ 0.75
Cspg5Q71M36 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.72■□□□□ 0.75
Cspg5Q71M36 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg5Q71M36 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.71■□□□□ 0.75
Cspg5Q71M36 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cspg5Q71M36 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg5Q71M36 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg5Q71M36 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.69■□□□□ 0.74
Cspg5Q71M36 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg5Q71M36 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg5Q71M36 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.68■□□□□ 0.74
Cspg5Q71M36 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cspg5Q71M36 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cspg5Q71M36 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.68■□□□□ 0.74
Cspg5Q71M36 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cspg5Q71M36 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.68■□□□□ 0.74
Cspg5Q71M36 Gm22240-201ENSMUST00000175225 82 ntBASIC19.68■□□□□ 0.74
Cspg5Q71M36 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.68■□□□□ 0.74
Cspg5Q71M36 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cspg5Q71M36 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Cspg5Q71M36 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cspg5Q71M36 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cspg5Q71M36 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.67■□□□□ 0.74
Cspg5Q71M36 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cspg5Q71M36 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms