Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx55Q6ZPL9 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.96■■□□□ 1.11
Ddx55Q6ZPL9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx55Q6ZPL9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx55Q6ZPL9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.96■■□□□ 1.11
Ddx55Q6ZPL9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx55Q6ZPL9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx55Q6ZPL9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
Ddx55Q6ZPL9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx55Q6ZPL9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.95■■□□□ 1.1
Ddx55Q6ZPL9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx55Q6ZPL9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx55Q6ZPL9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx55Q6ZPL9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx55Q6ZPL9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx55Q6ZPL9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx55Q6ZPL9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.94■■□□□ 1.1
Ddx55Q6ZPL9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx55Q6ZPL9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Ddx55Q6ZPL9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.94■■□□□ 1.1
Ddx55Q6ZPL9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.94■■□□□ 1.1
Ddx55Q6ZPL9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx55Q6ZPL9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
Ddx55Q6ZPL9 Gm13836-201ENSMUST00000121159 501 ntBASIC21.93■■□□□ 1.1
Ddx55Q6ZPL9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx55Q6ZPL9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx55Q6ZPL9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx55Q6ZPL9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx55Q6ZPL9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx55Q6ZPL9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx55Q6ZPL9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.92■■□□□ 1.1
Ddx55Q6ZPL9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx55Q6ZPL9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.92■■□□□ 1.1
Ddx55Q6ZPL9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx55Q6ZPL9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ddx55Q6ZPL9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx55Q6ZPL9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx55Q6ZPL9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx55Q6ZPL9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx55Q6ZPL9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.91■■□□□ 1.1
Ddx55Q6ZPL9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx55Q6ZPL9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx55Q6ZPL9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ddx55Q6ZPL9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx55Q6ZPL9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx55Q6ZPL9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx55Q6ZPL9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Gm11249-201ENSMUST00000117071 859 ntBASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx55Q6ZPL9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx55Q6ZPL9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx55Q6ZPL9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx55Q6ZPL9 Gm715-201ENSMUST00000117865 831 ntBASIC21.89■■□□□ 1.09
Ddx55Q6ZPL9 Gm44549-201ENSMUST00000208351 577 ntBASIC21.89■■□□□ 1.09
Ddx55Q6ZPL9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.89■■□□□ 1.09
Ddx55Q6ZPL9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ddx55Q6ZPL9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx55Q6ZPL9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx55Q6ZPL9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.88■■□□□ 1.09
Ddx55Q6ZPL9 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.88■■□□□ 1.09
Ddx55Q6ZPL9 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.88■■□□□ 1.09
Ddx55Q6ZPL9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx55Q6ZPL9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Ddx55Q6ZPL9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx55Q6ZPL9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx55Q6ZPL9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx55Q6ZPL9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ddx55Q6ZPL9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx55Q6ZPL9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx55Q6ZPL9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx55Q6ZPL9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Ddx55Q6ZPL9 Gm10698-201ENSMUST00000182663 604 ntBASIC21.87■■□□□ 1.09
Ddx55Q6ZPL9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.87■■□□□ 1.09
Ddx55Q6ZPL9 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.87■■□□□ 1.09
Ddx55Q6ZPL9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.86■■□□□ 1.09
Ddx55Q6ZPL9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms