Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm13148-201ENSMUST00000118892 745 ntBASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx58Q6Q899 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Ddx58Q6Q899 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx58Q6Q899 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx58Q6Q899 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx58Q6Q899 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx58Q6Q899 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx58Q6Q899 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
Ddx58Q6Q899 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ddx58Q6Q899 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx58Q6Q899 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx58Q6Q899 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx58Q6Q899 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx58Q6Q899 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx58Q6Q899 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Ddx58Q6Q899 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx58Q6Q899 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ddx58Q6Q899 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx58Q6Q899 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx58Q6Q899 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ddx58Q6Q899 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.71■■□□□ 1.39
Ddx58Q6Q899 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.71■■□□□ 1.39
Ddx58Q6Q899 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx58Q6Q899 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.7■■□□□ 1.39
Ddx58Q6Q899 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
Ddx58Q6Q899 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ddx58Q6Q899 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx58Q6Q899 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Gm12441-201ENSMUST00000121806 588 ntBASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Gm6211-202ENSMUST00000167849 925 ntBASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Gm27011-201ENSMUST00000182352 972 ntBASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Gm4968-201ENSMUST00000071458 858 ntBASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx58Q6Q899 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.68■■□□□ 1.38
Ddx58Q6Q899 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx58Q6Q899 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx58Q6Q899 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx58Q6Q899 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx58Q6Q899 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx58Q6Q899 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx58Q6Q899 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx58Q6Q899 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx58Q6Q899 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx58Q6Q899 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx58Q6Q899 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx58Q6Q899 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx58Q6Q899 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx58Q6Q899 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx58Q6Q899 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx58Q6Q899 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx58Q6Q899 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms