Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Dhx40Q6PE54 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx40Q6PE54 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx40Q6PE54 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx40Q6PE54 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Dhx40Q6PE54 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.26■□□□□ 0.99
Dhx40Q6PE54 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx40Q6PE54 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx40Q6PE54 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx40Q6PE54 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx40Q6PE54 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Dhx40Q6PE54 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Dhx40Q6PE54 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.23■□□□□ 0.99
Dhx40Q6PE54 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Dhx40Q6PE54 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Dhx40Q6PE54 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Dhx40Q6PE54 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Dhx40Q6PE54 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Dhx40Q6PE54 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.23■□□□□ 0.99
Dhx40Q6PE54 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Dhx40Q6PE54 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Dhx40Q6PE54 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Dhx40Q6PE54 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
Dhx40Q6PE54 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Dhx40Q6PE54 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Dhx40Q6PE54 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Dhx40Q6PE54 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Dhx40Q6PE54 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dhx40Q6PE54 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dhx40Q6PE54 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dhx40Q6PE54 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dhx40Q6PE54 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dhx40Q6PE54 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dhx40Q6PE54 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.21■□□□□ 0.99
Dhx40Q6PE54 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dhx40Q6PE54 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dhx40Q6PE54 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Dhx40Q6PE54 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Dhx40Q6PE54 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Dhx40Q6PE54 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.2■□□□□ 0.98
Dhx40Q6PE54 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dhx40Q6PE54 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Dhx40Q6PE54 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dhx40Q6PE54 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dhx40Q6PE54 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.18■□□□□ 0.98
Dhx40Q6PE54 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dhx40Q6PE54 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms