Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 AV356131-201ENSMUST00000206201 750 ntBASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl3Q6P1Y1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Gm42778-201ENSMUST00000199644 553 ntBASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rtl3Q6P1Y1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rtl3Q6P1Y1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Rtl3Q6P1Y1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.74■□□□□ 0.75
Rtl3Q6P1Y1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtl3Q6P1Y1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtl3Q6P1Y1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rtl3Q6P1Y1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.72■□□□□ 0.75
Rtl3Q6P1Y1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtl3Q6P1Y1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtl3Q6P1Y1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.7■□□□□ 0.74
Rtl3Q6P1Y1 Gm13234-201ENSMUST00000120010 747 ntBASIC19.7■□□□□ 0.74
Rtl3Q6P1Y1 Gm38205-201ENSMUST00000192243 258 ntBASIC19.7■□□□□ 0.74
Rtl3Q6P1Y1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.7■□□□□ 0.74
Rtl3Q6P1Y1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtl3Q6P1Y1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtl3Q6P1Y1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtl3Q6P1Y1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtl3Q6P1Y1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms