Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhga7Q6DD96 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhga7Q6DD96 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga7Q6DD96 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga7Q6DD96 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhga7Q6DD96 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhga7Q6DD96 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhga7Q6DD96 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Gm43137-201ENSMUST00000198052 594 ntBASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Spcs1-204ENSMUST00000226782 949 ntBASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhga7Q6DD96 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga7Q6DD96 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhga7Q6DD96 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga7Q6DD96 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga7Q6DD96 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhga7Q6DD96 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms