Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col11a2Q64739 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.6■■□□□ 1.37
Col11a2Q64739 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC23.59■■□□□ 1.37
Col11a2Q64739 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col11a2Q64739 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col11a2Q64739 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23.59■■□□□ 1.37
Col11a2Q64739 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col11a2Q64739 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Col11a2Q64739 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
Col11a2Q64739 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.59■■□□□ 1.37
Col11a2Q64739 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.58■■□□□ 1.37
Col11a2Q64739 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col11a2Q64739 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col11a2Q64739 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
Col11a2Q64739 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.58■■□□□ 1.37
Col11a2Q64739 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.58■■□□□ 1.37
Col11a2Q64739 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col11a2Q64739 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
Col11a2Q64739 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col11a2Q64739 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col11a2Q64739 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col11a2Q64739 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.58■■□□□ 1.36
Col11a2Q64739 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.58■■□□□ 1.36
Col11a2Q64739 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col11a2Q64739 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col11a2Q64739 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.57■■□□□ 1.36
Col11a2Q64739 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col11a2Q64739 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col11a2Q64739 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a2Q64739 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a2Q64739 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a2Q64739 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a2Q64739 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a2Q64739 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Col11a2Q64739 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a2Q64739 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a2Q64739 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.56■■□□□ 1.36
Col11a2Q64739 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.56■■□□□ 1.36
Col11a2Q64739 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.56■■□□□ 1.36
Col11a2Q64739 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.56■■□□□ 1.36
Col11a2Q64739 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a2Q64739 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Col11a2Q64739 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col11a2Q64739 Gm13158-201ENSMUST00000122007 736 ntBASIC23.55■■□□□ 1.36
Col11a2Q64739 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Col11a2Q64739 AC140264.2-202ENSMUST00000218746 817 ntBASIC23.55■■□□□ 1.36
Col11a2Q64739 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col11a2Q64739 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col11a2Q64739 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col11a2Q64739 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col11a2Q64739 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col11a2Q64739 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.54■■□□□ 1.36
Col11a2Q64739 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col11a2Q64739 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col11a2Q64739 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Col11a2Q64739 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col11a2Q64739 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.53■■□□□ 1.36
Col11a2Q64739 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC23.53■■□□□ 1.36
Col11a2Q64739 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.53■■□□□ 1.36
Col11a2Q64739 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC23.53■■□□□ 1.36
Col11a2Q64739 Gm43799-201ENSMUST00000201845 579 ntBASIC23.53■■□□□ 1.36
Col11a2Q64739 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a2Q64739 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Col11a2Q64739 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.52■■□□□ 1.36
Col11a2Q64739 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col11a2Q64739 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.52■■□□□ 1.36
Col11a2Q64739 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col11a2Q64739 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.52■■□□□ 1.36
Col11a2Q64739 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Col11a2Q64739 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
Col11a2Q64739 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a2Q64739 Gm15378-201ENSMUST00000121894 207 ntBASIC23.51■■□□□ 1.35
Col11a2Q64739 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.51■■□□□ 1.35
Col11a2Q64739 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Col11a2Q64739 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a2Q64739 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a2Q64739 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a2Q64739 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a2Q64739 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a2Q64739 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a2Q64739 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a2Q64739 Gm9987-201ENSMUST00000069768 567 ntBASIC23.5■■□□□ 1.35
Col11a2Q64739 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a2Q64739 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a2Q64739 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Col11a2Q64739 AC175538.1-201ENSMUST00000225343 1269 ntBASIC23.5■■□□□ 1.35
Col11a2Q64739 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a2Q64739 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms