Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.32■□□□□ 0.52
Sdc3Q64519 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc3Q64519 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc3Q64519 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc3Q64519 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Sdc3Q64519 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc3Q64519 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sdc3Q64519 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Gm27405-201ENSMUST00000184201 112 ntBASIC18.31■□□□□ 0.52
Sdc3Q64519 AV356131-201ENSMUST00000206201 750 ntBASIC18.31■□□□□ 0.52
Sdc3Q64519 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.31■□□□□ 0.52
Sdc3Q64519 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sdc3Q64519 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.31■□□□□ 0.52
Sdc3Q64519 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Sdc3Q64519 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc3Q64519 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.31■□□□□ 0.52
Sdc3Q64519 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc3Q64519 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.3■□□□□ 0.52
Sdc3Q64519 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc3Q64519 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc3Q64519 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc3Q64519 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sdc3Q64519 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sdc3Q64519 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.29■□□□□ 0.52
Sdc3Q64519 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.29■□□□□ 0.52
Sdc3Q64519 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc3Q64519 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.28■□□□□ 0.52
Sdc3Q64519 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc3Q64519 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.28■□□□□ 0.52
Sdc3Q64519 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc3Q64519 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc3Q64519 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc3Q64519 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
Sdc3Q64519 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc3Q64519 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc3Q64519 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sdc3Q64519 Gm13234-201ENSMUST00000120010 747 ntBASIC18.27■□□□□ 0.52
Sdc3Q64519 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.27■□□□□ 0.52
Sdc3Q64519 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.27■□□□□ 0.52
Sdc3Q64519 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.27■□□□□ 0.52
Sdc3Q64519 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sdc3Q64519 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc3Q64519 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc3Q64519 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sdc3Q64519 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdc3Q64519 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdc3Q64519 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.26■□□□□ 0.51
Sdc3Q64519 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.26■□□□□ 0.51
Sdc3Q64519 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.26■□□□□ 0.51
Sdc3Q64519 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.26■□□□□ 0.51
Sdc3Q64519 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc3Q64519 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.25■□□□□ 0.51
Sdc3Q64519 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.25■□□□□ 0.51
Sdc3Q64519 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sdc3Q64519 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.24■□□□□ 0.51
Sdc3Q64519 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Sdc3Q64519 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms