Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.06■□□□□ 0
Foxc2Q61850 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Foxc2Q61850 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxc2Q61850 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Foxc2Q61850 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxc2Q61850 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.06■□□□□ 0
Foxc2Q61850 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Foxc2Q61850 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.06■□□□□ 0
Foxc2Q61850 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxc2Q61850 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Foxc2Q61850 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.06■□□□□ 0
Foxc2Q61850 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Foxc2Q61850 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Foxc2Q61850 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Foxc2Q61850 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.05■□□□□ -0
Foxc2Q61850 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.05■□□□□ -0
Foxc2Q61850 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.05■□□□□ -0
Foxc2Q61850 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.05■□□□□ -0
Foxc2Q61850 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxc2Q61850 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Foxc2Q61850 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxc2Q61850 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Foxc2Q61850 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.05■□□□□ -0
Foxc2Q61850 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxc2Q61850 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxc2Q61850 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.04■□□□□ -0
Foxc2Q61850 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxc2Q61850 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.04■□□□□ -0
Foxc2Q61850 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.04■□□□□ -0
Foxc2Q61850 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.04■□□□□ -0
Foxc2Q61850 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Foxc2Q61850 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxc2Q61850 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Foxc2Q61850 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.04■□□□□ -0
Foxc2Q61850 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.04■□□□□ -0
Foxc2Q61850 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.04■□□□□ -0
Foxc2Q61850 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxc2Q61850 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.04■□□□□ -0
Foxc2Q61850 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxc2Q61850 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Foxc2Q61850 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Foxc2Q61850 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Foxc2Q61850 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Foxc2Q61850 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Foxc2Q61850 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Foxc2Q61850 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Foxc2Q61850 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Foxc2Q61850 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Foxc2Q61850 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Foxc2Q61850 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Foxc2Q61850 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Foxc2Q61850 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Foxc2Q61850 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.02■□□□□ -0
Foxc2Q61850 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Foxc2Q61850 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.02■□□□□ -0
Foxc2Q61850 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Foxc2Q61850 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Foxc2Q61850 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Foxc2Q61850 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Foxc2Q61850 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc2Q61850 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc2Q61850 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Foxc2Q61850 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc2Q61850 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc2Q61850 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc2Q61850 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Foxc2Q61850 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.01□□□□□ -0.01
Foxc2Q61850 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.01□□□□□ -0.01
Foxc2Q61850 Gm26833-201ENSMUST00000180899 440 ntBASIC15.01□□□□□ -0.01
Foxc2Q61850 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.01□□□□□ -0.01
Foxc2Q61850 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Foxc2Q61850 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Foxc2Q61850 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Foxc2Q61850 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.01□□□□□ -0.01
Foxc2Q61850 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc2Q61850 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15□□□□□ -0.01
Foxc2Q61850 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc2Q61850 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc2Q61850 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Foxc2Q61850 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc2Q61850 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Foxc2Q61850 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc2Q61850 Gm2011-201ENSMUST00000203124 1263 ntBASIC15□□□□□ -0.01
Foxc2Q61850 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15□□□□□ -0.01
Foxc2Q61850 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15□□□□□ -0.01
Foxc2Q61850 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc2Q61850 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc2Q61850 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15□□□□□ -0.01
Foxc2Q61850 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms