Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rai1Q61818 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rai1Q61818 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rai1Q61818 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rai1Q61818 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rai1Q61818 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rai1Q61818 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.65■□□□□ 0.58
Rai1Q61818 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rai1Q61818 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rai1Q61818 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rai1Q61818 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rai1Q61818 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rai1Q61818 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rai1Q61818 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rai1Q61818 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rai1Q61818 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rai1Q61818 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rai1Q61818 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rai1Q61818 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.64■□□□□ 0.57
Rai1Q61818 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rai1Q61818 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.63■□□□□ 0.57
Rai1Q61818 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.63■□□□□ 0.57
Rai1Q61818 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rai1Q61818 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rai1Q61818 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rai1Q61818 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rai1Q61818 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rai1Q61818 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.62■□□□□ 0.57
Rai1Q61818 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.62■□□□□ 0.57
Rai1Q61818 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rai1Q61818 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rai1Q61818 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rai1Q61818 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rai1Q61818 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rai1Q61818 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rai1Q61818 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rai1Q61818 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rai1Q61818 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rai1Q61818 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rai1Q61818 Gm12896-201ENSMUST00000118430 226 ntBASIC18.6■□□□□ 0.57
Rai1Q61818 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.6■□□□□ 0.57
Rai1Q61818 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.6■□□□□ 0.57
Rai1Q61818 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rai1Q61818 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rai1Q61818 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.6■□□□□ 0.57
Rai1Q61818 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rai1Q61818 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rai1Q61818 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rai1Q61818 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rai1Q61818 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rai1Q61818 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rai1Q61818 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rai1Q61818 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rai1Q61818 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rai1Q61818 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rai1Q61818 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rai1Q61818 Mir6982-201ENSMUST00000184354 68 ntBASIC18.59■□□□□ 0.57
Rai1Q61818 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Rai1Q61818 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.59■□□□□ 0.57
Rai1Q61818 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rai1Q61818 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rai1Q61818 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rai1Q61818 Gm5643-201ENSMUST00000117081 966 ntBASIC18.58■□□□□ 0.57
Rai1Q61818 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.58■□□□□ 0.57
Rai1Q61818 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.58■□□□□ 0.57
Rai1Q61818 Dio3-201ENSMUST00000097228 1449 ntBASIC18.58■□□□□ 0.57
Rai1Q61818 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.58■□□□□ 0.56
Rai1Q61818 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rai1Q61818 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rai1Q61818 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rai1Q61818 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rai1Q61818 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rai1Q61818 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rai1Q61818 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.57■□□□□ 0.56
Rai1Q61818 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rai1Q61818 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rai1Q61818 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rai1Q61818 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rai1Q61818 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rai1Q61818 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.56■□□□□ 0.56
Rai1Q61818 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Rai1Q61818 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms