Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cd47Q61735 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cd47Q61735 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd47Q61735 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd47Q61735 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd47Q61735 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.3■□□□□ 0.36
Cd47Q61735 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.3■□□□□ 0.36
Cd47Q61735 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd47Q61735 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd47Q61735 Serp2-204ENSMUST00000228055 705 ntBASIC17.3■□□□□ 0.36
Cd47Q61735 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd47Q61735 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.3■□□□□ 0.36
Cd47Q61735 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd47Q61735 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd47Q61735 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd47Q61735 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd47Q61735 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cd47Q61735 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd47Q61735 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.29■□□□□ 0.36
Cd47Q61735 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.29■□□□□ 0.36
Cd47Q61735 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd47Q61735 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.29■□□□□ 0.36
Cd47Q61735 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cd47Q61735 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.29■□□□□ 0.36
Cd47Q61735 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd47Q61735 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.29■□□□□ 0.36
Cd47Q61735 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd47Q61735 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.28■□□□□ 0.36
Cd47Q61735 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd47Q61735 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.28■□□□□ 0.36
Cd47Q61735 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.28■□□□□ 0.36
Cd47Q61735 Gm43137-201ENSMUST00000198052 594 ntBASIC17.28■□□□□ 0.36
Cd47Q61735 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cd47Q61735 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd47Q61735 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Cd47Q61735 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cd47Q61735 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Cd47Q61735 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd47Q61735 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd47Q61735 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd47Q61735 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.27■□□□□ 0.36
Cd47Q61735 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd47Q61735 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.27■□□□□ 0.36
Cd47Q61735 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd47Q61735 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd47Q61735 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.27■□□□□ 0.35
Cd47Q61735 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cd47Q61735 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd47Q61735 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cd47Q61735 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Cd47Q61735 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd47Q61735 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd47Q61735 Gm21956-201ENSMUST00000179946 522 ntBASIC17.26■□□□□ 0.35
Cd47Q61735 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.26■□□□□ 0.35
Cd47Q61735 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cd47Q61735 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cd47Q61735 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd47Q61735 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms