Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Foxc1Q61572 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Foxc1Q61572 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Foxc1Q61572 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxc1Q61572 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxc1Q61572 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.94□□□□□ -0.18
Foxc1Q61572 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxc1Q61572 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxc1Q61572 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxc1Q61572 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxc1Q61572 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Foxc1Q61572 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.93□□□□□ -0.18
Foxc1Q61572 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.93□□□□□ -0.18
Foxc1Q61572 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Foxc1Q61572 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Foxc1Q61572 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.92□□□□□ -0.18
Foxc1Q61572 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Gm42569-201ENSMUST00000200539 472 ntBASIC13.92□□□□□ -0.18
Foxc1Q61572 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Foxc1Q61572 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.92□□□□□ -0.18
Foxc1Q61572 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Foxc1Q61572 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Foxc1Q61572 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Foxc1Q61572 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.91□□□□□ -0.18
Foxc1Q61572 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.91□□□□□ -0.18
Foxc1Q61572 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Foxc1Q61572 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Foxc1Q61572 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Foxc1Q61572 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Foxc1Q61572 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Foxc1Q61572 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Foxc1Q61572 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Foxc1Q61572 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Foxc1Q61572 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.9□□□□□ -0.18
Foxc1Q61572 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxc1Q61572 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Foxc1Q61572 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
Foxc1Q61572 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.9□□□□□ -0.19
Foxc1Q61572 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
Foxc1Q61572 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxc1Q61572 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.89□□□□□ -0.19
Foxc1Q61572 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.89□□□□□ -0.19
Foxc1Q61572 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.89□□□□□ -0.19
Foxc1Q61572 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.89□□□□□ -0.19
Foxc1Q61572 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.89□□□□□ -0.19
Foxc1Q61572 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Foxc1Q61572 Gm10493-201ENSMUST00000097270 612 ntBASIC13.89□□□□□ -0.19
Foxc1Q61572 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Foxc1Q61572 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms