Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.04■□□□□ 0.32
Cfhr1Q61406 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.04■□□□□ 0.32
Cfhr1Q61406 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfhr1Q61406 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.03■□□□□ 0.32
Cfhr1Q61406 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cfhr1Q61406 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfhr1Q61406 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfhr1Q61406 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfhr1Q61406 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.02■□□□□ 0.32
Cfhr1Q61406 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.02■□□□□ 0.32
Cfhr1Q61406 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.02■□□□□ 0.32
Cfhr1Q61406 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cfhr1Q61406 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfhr1Q61406 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cfhr1Q61406 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.02■□□□□ 0.31
Cfhr1Q61406 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Cfhr1Q61406 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.02■□□□□ 0.31
Cfhr1Q61406 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cfhr1Q61406 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cfhr1Q61406 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.01■□□□□ 0.31
Cfhr1Q61406 Gm37856-201ENSMUST00000191634 999 ntBASIC17.01■□□□□ 0.31
Cfhr1Q61406 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cfhr1Q61406 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cfhr1Q61406 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17■□□□□ 0.31
Cfhr1Q61406 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17■□□□□ 0.31
Cfhr1Q61406 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cfhr1Q61406 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cfhr1Q61406 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Cfhr1Q61406 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.99■□□□□ 0.31
Cfhr1Q61406 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.99■□□□□ 0.31
Cfhr1Q61406 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cfhr1Q61406 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cfhr1Q61406 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cfhr1Q61406 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cfhr1Q61406 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cfhr1Q61406 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cfhr1Q61406 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.98■□□□□ 0.31
Cfhr1Q61406 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cfhr1Q61406 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.98■□□□□ 0.31
Cfhr1Q61406 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cfhr1Q61406 Gm10812-201ENSMUST00000099864 546 ntBASIC16.98■□□□□ 0.31
Cfhr1Q61406 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cfhr1Q61406 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cfhr1Q61406 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms