Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ift88Q61371 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ift88Q61371 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ift88Q61371 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.12■□□□□ 0.97
Ift88Q61371 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.12■□□□□ 0.97
Ift88Q61371 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ift88Q61371 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ift88Q61371 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ift88Q61371 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ift88Q61371 Gm12922-201ENSMUST00000120626 809 ntBASIC21.11■□□□□ 0.97
Ift88Q61371 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.11■□□□□ 0.97
Ift88Q61371 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Ift88Q61371 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ift88Q61371 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ift88Q61371 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ift88Q61371 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ift88Q61371 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ift88Q61371 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ift88Q61371 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ift88Q61371 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.11■□□□□ 0.97
Ift88Q61371 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ift88Q61371 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ift88Q61371 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ift88Q61371 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ift88Q61371 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.1■□□□□ 0.97
Ift88Q61371 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ift88Q61371 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ift88Q61371 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ift88Q61371 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ift88Q61371 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ift88Q61371 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ift88Q61371 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ift88Q61371 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.09■□□□□ 0.97
Ift88Q61371 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ift88Q61371 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ift88Q61371 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ift88Q61371 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ift88Q61371 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ift88Q61371 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ift88Q61371 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ift88Q61371 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ift88Q61371 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.08■□□□□ 0.97
Ift88Q61371 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ift88Q61371 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ift88Q61371 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ift88Q61371 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.08■□□□□ 0.97
Ift88Q61371 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ift88Q61371 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.08■□□□□ 0.96
Ift88Q61371 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ift88Q61371 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ift88Q61371 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ift88Q61371 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.07■□□□□ 0.96
Ift88Q61371 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ift88Q61371 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ift88Q61371 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.07■□□□□ 0.96
Ift88Q61371 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ift88Q61371 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ift88Q61371 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ift88Q61371 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ift88Q61371 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ift88Q61371 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ift88Q61371 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ift88Q61371 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ift88Q61371 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ift88Q61371 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ift88Q61371 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ift88Q61371 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ift88Q61371 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ift88Q61371 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ift88Q61371 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ift88Q61371 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ift88Q61371 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ift88Q61371 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Ift88Q61371 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ift88Q61371 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ift88Q61371 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Ift88Q61371 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.05■□□□□ 0.96
Ift88Q61371 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ift88Q61371 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Ift88Q61371 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms