Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm12896-201ENSMUST00000118430 226 ntBASIC21.14■□□□□ 0.97
Cln3Q61124 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.14■□□□□ 0.97
Cln3Q61124 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cln3Q61124 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cln3Q61124 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cln3Q61124 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cln3Q61124 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cln3Q61124 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Cln3Q61124 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cln3Q61124 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cln3Q61124 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cln3Q61124 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cln3Q61124 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cln3Q61124 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cln3Q61124 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.11■□□□□ 0.97
Cln3Q61124 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.11■□□□□ 0.97
Cln3Q61124 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.11■□□□□ 0.97
Cln3Q61124 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.11■□□□□ 0.97
Cln3Q61124 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.11■□□□□ 0.97
Cln3Q61124 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.11■□□□□ 0.97
Cln3Q61124 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cln3Q61124 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cln3Q61124 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cln3Q61124 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cln3Q61124 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cln3Q61124 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.11■□□□□ 0.97
Cln3Q61124 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.11■□□□□ 0.97
Cln3Q61124 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.11■□□□□ 0.97
Cln3Q61124 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cln3Q61124 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cln3Q61124 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cln3Q61124 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cln3Q61124 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cln3Q61124 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cln3Q61124 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cln3Q61124 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.1■□□□□ 0.97
Cln3Q61124 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.1■□□□□ 0.97
Cln3Q61124 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cln3Q61124 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cln3Q61124 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cln3Q61124 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cln3Q61124 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cln3Q61124 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cln3Q61124 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cln3Q61124 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cln3Q61124 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cln3Q61124 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cln3Q61124 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cln3Q61124 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.09■□□□□ 0.97
Cln3Q61124 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cln3Q61124 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cln3Q61124 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cln3Q61124 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Cln3Q61124 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cln3Q61124 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cln3Q61124 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cln3Q61124 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.08■□□□□ 0.97
Cln3Q61124 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cln3Q61124 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cln3Q61124 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Cln3Q61124 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cln3Q61124 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cln3Q61124 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cln3Q61124 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Cln3Q61124 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cln3Q61124 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.07■□□□□ 0.96
Cln3Q61124 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cln3Q61124 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cln3Q61124 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cln3Q61124 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cln3Q61124 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cln3Q61124 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cln3Q61124 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cln3Q61124 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cln3Q61124 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cln3Q61124 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cln3Q61124 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cln3Q61124 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cln3Q61124 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cln3Q61124 Mir7071-201ENSMUST00000184847 69 ntBASIC21.06■□□□□ 0.96
Cln3Q61124 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cln3Q61124 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cln3Q61124 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Cln3Q61124 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cln3Q61124 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cln3Q61124 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cln3Q61124 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cln3Q61124 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms