Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sdf4Q61112 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdf4Q61112 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdf4Q61112 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.4■□□□□ 0.7
Sdf4Q61112 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdf4Q61112 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdf4Q61112 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdf4Q61112 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.39■□□□□ 0.69
Sdf4Q61112 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sdf4Q61112 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Sdf4Q61112 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sdf4Q61112 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdf4Q61112 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdf4Q61112 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdf4Q61112 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdf4Q61112 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sdf4Q61112 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdf4Q61112 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdf4Q61112 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdf4Q61112 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sdf4Q61112 Gm15039-201ENSMUST00000118914 875 ntBASIC19.38■□□□□ 0.69
Sdf4Q61112 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.38■□□□□ 0.69
Sdf4Q61112 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sdf4Q61112 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
Sdf4Q61112 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.38■□□□□ 0.69
Sdf4Q61112 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sdf4Q61112 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdf4Q61112 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sdf4Q61112 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Sdf4Q61112 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sdf4Q61112 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.37■□□□□ 0.69
Sdf4Q61112 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sdf4Q61112 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.37■□□□□ 0.69
Sdf4Q61112 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.37■□□□□ 0.69
Sdf4Q61112 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdf4Q61112 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Sdf4Q61112 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sdf4Q61112 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sdf4Q61112 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Sdf4Q61112 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.36■□□□□ 0.69
Sdf4Q61112 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sdf4Q61112 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sdf4Q61112 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdf4Q61112 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sdf4Q61112 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdf4Q61112 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdf4Q61112 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdf4Q61112 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Sdf4Q61112 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdf4Q61112 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdf4Q61112 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Sdf4Q61112 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdf4Q61112 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sdf4Q61112 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdf4Q61112 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sdf4Q61112 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Sdf4Q61112 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sdf4Q61112 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.34■□□□□ 0.69
Sdf4Q61112 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.34■□□□□ 0.69
Sdf4Q61112 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Sdf4Q61112 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sdf4Q61112 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdf4Q61112 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.33■□□□□ 0.68
Sdf4Q61112 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sdf4Q61112 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sdf4Q61112 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sdf4Q61112 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sdf4Q61112 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdf4Q61112 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms