Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Xrcc1Q60596 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Gm13234-201ENSMUST00000120010 747 ntBASIC18.25■□□□□ 0.51
Xrcc1Q60596 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Gm10033-202ENSMUST00000211874 928 ntBASIC18.25■□□□□ 0.51
Xrcc1Q60596 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Xrcc1Q60596 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.24■□□□□ 0.51
Xrcc1Q60596 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Gm26571-201ENSMUST00000181399 666 ntBASIC18.24■□□□□ 0.51
Xrcc1Q60596 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrcc1Q60596 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Xrcc1Q60596 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Xrcc1Q60596 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrcc1Q60596 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Xrcc1Q60596 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrcc1Q60596 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrcc1Q60596 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrcc1Q60596 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.23■□□□□ 0.51
Xrcc1Q60596 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrcc1Q60596 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrcc1Q60596 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrcc1Q60596 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Xrcc1Q60596 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Xrcc1Q60596 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrcc1Q60596 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.22■□□□□ 0.51
Xrcc1Q60596 Gm38205-201ENSMUST00000192243 258 ntBASIC18.22■□□□□ 0.51
Xrcc1Q60596 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.22■□□□□ 0.51
Xrcc1Q60596 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.22■□□□□ 0.51
Xrcc1Q60596 Gm18671-201ENSMUST00000214826 683 ntBASIC18.22■□□□□ 0.51
Xrcc1Q60596 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.22■□□□□ 0.51
Xrcc1Q60596 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrcc1Q60596 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.22■□□□□ 0.51
Xrcc1Q60596 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrcc1Q60596 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrcc1Q60596 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrcc1Q60596 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Xrcc1Q60596 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
Xrcc1Q60596 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.2■□□□□ 0.5
Xrcc1Q60596 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Xrcc1Q60596 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Xrcc1Q60596 Gm10849-201ENSMUST00000100397 618 ntBASIC18.2■□□□□ 0.5
Xrcc1Q60596 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrcc1Q60596 Gm7860-201ENSMUST00000121190 879 ntBASIC18.2■□□□□ 0.5
Xrcc1Q60596 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Xrcc1Q60596 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms