Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.11■□□□□ 0.65
Pabpn1lQ5XFR0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Gm43566-201ENSMUST00000196851 808 ntBASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pabpn1lQ5XFR0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Gm45444-201ENSMUST00000211394 898 ntBASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pabpn1lQ5XFR0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1lQ5XFR0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1lQ5XFR0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1lQ5XFR0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1lQ5XFR0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1lQ5XFR0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pabpn1lQ5XFR0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1lQ5XFR0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1lQ5XFR0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pabpn1lQ5XFR0 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.05■□□□□ 0.64
Pabpn1lQ5XFR0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pabpn1lQ5XFR0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms