Protein–RNA interactions for Protein: Q5TIS6

Noto, Homeobox protein notochord, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NotoQ5TIS6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Gm12251-201ENSMUST00000117893 792 ntBASIC15.7■□□□□ 0.1
NotoQ5TIS6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
NotoQ5TIS6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.69■□□□□ 0.1
NotoQ5TIS6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.69■□□□□ 0.1
NotoQ5TIS6 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.69■□□□□ 0.1
NotoQ5TIS6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NotoQ5TIS6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 BC021767-201ENSMUST00000126387 1716 ntBASIC15.68■□□□□ 0.1
NotoQ5TIS6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NotoQ5TIS6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NotoQ5TIS6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NotoQ5TIS6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NotoQ5TIS6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NotoQ5TIS6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NotoQ5TIS6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NotoQ5TIS6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.67■□□□□ 0.1
NotoQ5TIS6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NotoQ5TIS6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NotoQ5TIS6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NotoQ5TIS6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.66■□□□□ 0.1
NotoQ5TIS6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NotoQ5TIS6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.66■□□□□ 0.1
NotoQ5TIS6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NotoQ5TIS6 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.66■□□□□ 0.1
NotoQ5TIS6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.65■□□□□ 0.1
NotoQ5TIS6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NotoQ5TIS6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NotoQ5TIS6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NotoQ5TIS6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NotoQ5TIS6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NotoQ5TIS6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NotoQ5TIS6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NotoQ5TIS6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NotoQ5TIS6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms