Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Gm29257-201ENSMUST00000186115 639 ntBASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav2Q5R1I9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Gm38205-201ENSMUST00000192243 258 ntBASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav2Q5R1I9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav2Q5R1I9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav2Q5R1I9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav2Q5R1I9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav2Q5R1I9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Gm13146-201ENSMUST00000118508 780 ntBASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav2Q5R1I9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav2Q5R1I9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav2Q5R1I9 Gm12933-201ENSMUST00000120203 872 ntBASIC15.19■□□□□ 0.02
Trav2Q5R1I9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav2Q5R1I9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav2Q5R1I9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav2Q5R1I9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav2Q5R1I9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav2Q5R1I9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav2Q5R1I9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav2Q5R1I9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Gm10602-201ENSMUST00000098239 609 ntBASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav2Q5R1I9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Gm7860-201ENSMUST00000121190 879 ntBASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav2Q5R1I9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms