Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-2Q5R1I4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-2Q5R1I4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav6-2Q5R1I4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-2Q5R1I4 Gm22240-201ENSMUST00000175225 82 ntBASIC16.84■□□□□ 0.29
Trav6-2Q5R1I4 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.84■□□□□ 0.29
Trav6-2Q5R1I4 Gm8520-201ENSMUST00000186517 868 ntBASIC16.84■□□□□ 0.29
Trav6-2Q5R1I4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-2Q5R1I4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav6-2Q5R1I4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-2Q5R1I4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-2Q5R1I4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Gm12527-201ENSMUST00000117967 564 ntBASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav6-2Q5R1I4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-2Q5R1I4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav6-2Q5R1I4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-2Q5R1I4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-2Q5R1I4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav6-2Q5R1I4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav6-2Q5R1I4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-2Q5R1I4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.82■□□□□ 0.28
Trav6-2Q5R1I4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-2Q5R1I4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trav6-2Q5R1I4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Gm20049-201ENSMUST00000219950 730 ntBASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.8■□□□□ 0.28
Trav6-2Q5R1I4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-2Q5R1I4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-2Q5R1I4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav6-2Q5R1I4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav6-2Q5R1I4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Trav6-2Q5R1I4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-2Q5R1I4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav6-2Q5R1I4 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.77■□□□□ 0.28
Trav6-2Q5R1I4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-2Q5R1I4 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.77■□□□□ 0.28
Trav6-2Q5R1I4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-2Q5R1I4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-2Q5R1I4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-2Q5R1I4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-2Q5R1I4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms