Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-4Q5R1H9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Mir6236-201ENSMUST00000184437 123 ntBASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-4Q5R1H9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-4Q5R1H9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav7d-4Q5R1H9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav7d-4Q5R1H9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-4Q5R1H9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav7d-4Q5R1H9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-4Q5R1H9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-4Q5R1H9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-4Q5R1H9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-4Q5R1H9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-4Q5R1H9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-4Q5R1H9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav7d-4Q5R1H9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-4Q5R1H9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms