Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm9870-201ENSMUST00000063874 645 ntBASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Etf1-202ENSMUST00000180351 108 ntBASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Gm5921-201ENSMUST00000075898 882 ntBASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms