Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8d-2Q5R1B6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Gm44549-201ENSMUST00000208351 577 ntBASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.75■□□□□ 0.59
Trav8d-2Q5R1B6 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8d-2Q5R1B6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Gm11249-201ENSMUST00000117071 859 ntBASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Gm15378-201ENSMUST00000121894 207 ntBASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8d-2Q5R1B6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8d-2Q5R1B6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Gm15565-201ENSMUST00000118890 427 ntBASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Gm11643-201ENSMUST00000119578 864 ntBASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.71■□□□□ 0.59
Trav8d-2Q5R1B6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Gm10698-201ENSMUST00000182663 604 ntBASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Gm37055-201ENSMUST00000191866 133 ntBASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trav8d-2Q5R1B6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trav8d-2Q5R1B6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Trav8d-2Q5R1B6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav8d-2Q5R1B6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav8d-2Q5R1B6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms