Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rnf43Q5NCP0 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.5■□□□□ 0.71
Rnf43Q5NCP0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf43Q5NCP0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.5■□□□□ 0.71
Rnf43Q5NCP0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rnf43Q5NCP0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.5■□□□□ 0.71
Rnf43Q5NCP0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rnf43Q5NCP0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rnf43Q5NCP0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf43Q5NCP0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Trmt13-210ENSMUST00000198454 880 ntBASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Gm10812-201ENSMUST00000099864 546 ntBASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf43Q5NCP0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf43Q5NCP0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Iqck-206ENSMUST00000208658 2891 ntBASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Rab3c-203ENSMUST00000224180 967 ntBASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf43Q5NCP0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf43Q5NCP0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Gm7860-201ENSMUST00000121190 879 ntBASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf43Q5NCP0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf43Q5NCP0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf43Q5NCP0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf43Q5NCP0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf43Q5NCP0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf43Q5NCP0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf43Q5NCP0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms