Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clhc1Q5M6W3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clhc1Q5M6W3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Clhc1Q5M6W3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clhc1Q5M6W3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clhc1Q5M6W3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.39■□□□□ 0.53
Clhc1Q5M6W3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clhc1Q5M6W3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clhc1Q5M6W3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clhc1Q5M6W3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clhc1Q5M6W3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clhc1Q5M6W3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Clhc1Q5M6W3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clhc1Q5M6W3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clhc1Q5M6W3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clhc1Q5M6W3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clhc1Q5M6W3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clhc1Q5M6W3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Clhc1Q5M6W3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Clhc1Q5M6W3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clhc1Q5M6W3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clhc1Q5M6W3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clhc1Q5M6W3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Clhc1Q5M6W3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.33■□□□□ 0.52
Clhc1Q5M6W3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms