Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.9■□□□□ 0.78
Vps41Q5KU39 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Vps41Q5KU39 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Vps41Q5KU39 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.89■□□□□ 0.77
Vps41Q5KU39 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.89■□□□□ 0.77
Vps41Q5KU39 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps41Q5KU39 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vps41Q5KU39 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.88■□□□□ 0.77
Vps41Q5KU39 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.88■□□□□ 0.77
Vps41Q5KU39 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.88■□□□□ 0.77
Vps41Q5KU39 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps41Q5KU39 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps41Q5KU39 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps41Q5KU39 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps41Q5KU39 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps41Q5KU39 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps41Q5KU39 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps41Q5KU39 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Vps41Q5KU39 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Vps41Q5KU39 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps41Q5KU39 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps41Q5KU39 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vps41Q5KU39 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vps41Q5KU39 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.84■□□□□ 0.77
Vps41Q5KU39 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Vps41Q5KU39 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Vps41Q5KU39 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps41Q5KU39 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.83■□□□□ 0.77
Vps41Q5KU39 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps41Q5KU39 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Vps41Q5KU39 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps41Q5KU39 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Vps41Q5KU39 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vps41Q5KU39 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps41Q5KU39 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 129.2 ms