Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Vps13aQ5H8C4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Gm15378-201ENSMUST00000121894 207 ntBASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps13aQ5H8C4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Vps13aQ5H8C4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps13aQ5H8C4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.24■□□□□ 0.67
Vps13aQ5H8C4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps13aQ5H8C4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.24■□□□□ 0.67
Vps13aQ5H8C4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.24■□□□□ 0.67
Vps13aQ5H8C4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps13aQ5H8C4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Vps13aQ5H8C4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps13aQ5H8C4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps13aQ5H8C4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps13aQ5H8C4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.21■□□□□ 0.67
Vps13aQ5H8C4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.21■□□□□ 0.67
Vps13aQ5H8C4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps13aQ5H8C4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vps13aQ5H8C4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Gm5417-201ENSMUST00000079706 384 ntBASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Gm2399-201ENSMUST00000104944 225 ntBASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps13aQ5H8C4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps13aQ5H8C4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms