Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Bdp1Q571C7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Bdp1Q571C7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Bdp1Q571C7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Gm9103-201ENSMUST00000119371 405 ntBASIC19.65■□□□□ 0.74
Bdp1Q571C7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.65■□□□□ 0.74
Bdp1Q571C7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Bdp1Q571C7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Bdp1Q571C7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Bdp1Q571C7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Bdp1Q571C7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Bdp1Q571C7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Bdp1Q571C7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
Bdp1Q571C7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Bdp1Q571C7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Bdp1Q571C7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Bdp1Q571C7 Gm21814-202ENSMUST00000203277 873 ntBASIC19.63■□□□□ 0.73
Bdp1Q571C7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Bdp1Q571C7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Bdp1Q571C7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Bdp1Q571C7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Bdp1Q571C7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Bdp1Q571C7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Bdp1Q571C7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Bdp1Q571C7 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.63■□□□□ 0.73
Bdp1Q571C7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.63■□□□□ 0.73
Bdp1Q571C7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Bdp1Q571C7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Bdp1Q571C7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.63■□□□□ 0.73
Bdp1Q571C7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Bdp1Q571C7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Bdp1Q571C7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Bdp1Q571C7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Bdp1Q571C7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Bdp1Q571C7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Bdp1Q571C7 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.62■□□□□ 0.73
Bdp1Q571C7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Bdp1Q571C7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.61■□□□□ 0.73
Bdp1Q571C7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Bdp1Q571C7 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.61■□□□□ 0.73
Bdp1Q571C7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Bdp1Q571C7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Bdp1Q571C7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Bdp1Q571C7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Bdp1Q571C7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Bdp1Q571C7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Bdp1Q571C7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Bdp1Q571C7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Bdp1Q571C7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Bdp1Q571C7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Bdp1Q571C7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Bdp1Q571C7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Bdp1Q571C7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Bdp1Q571C7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Bdp1Q571C7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Bdp1Q571C7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.58■□□□□ 0.73
Bdp1Q571C7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Bdp1Q571C7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Bdp1Q571C7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Bdp1Q571C7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Bdp1Q571C7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Bdp1Q571C7 AA414768-201ENSMUST00000121924 1257 ntBASIC19.58■□□□□ 0.72
Bdp1Q571C7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.58■□□□□ 0.72
Bdp1Q571C7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.58■□□□□ 0.72
Bdp1Q571C7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Bdp1Q571C7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Bdp1Q571C7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
Bdp1Q571C7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Bdp1Q571C7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms