Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Defb28Q3V2L0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Defb28Q3V2L0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Defb28Q3V2L0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Defb28Q3V2L0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb28Q3V2L0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb28Q3V2L0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb28Q3V2L0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb28Q3V2L0 Gm44549-201ENSMUST00000208351 577 ntBASIC18.5■□□□□ 0.55
Defb28Q3V2L0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb28Q3V2L0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Defb28Q3V2L0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Defb28Q3V2L0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb28Q3V2L0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb28Q3V2L0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.48■□□□□ 0.55
Defb28Q3V2L0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb28Q3V2L0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Defb28Q3V2L0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Defb28Q3V2L0 Gm2399-201ENSMUST00000104944 225 ntBASIC18.46■□□□□ 0.55
Defb28Q3V2L0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.46■□□□□ 0.55
Defb28Q3V2L0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Defb28Q3V2L0 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.46■□□□□ 0.55
Defb28Q3V2L0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.46■□□□□ 0.55
Defb28Q3V2L0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.46■□□□□ 0.55
Defb28Q3V2L0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Defb28Q3V2L0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Defb28Q3V2L0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Defb28Q3V2L0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.46■□□□□ 0.54
Defb28Q3V2L0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.45■□□□□ 0.54
Defb28Q3V2L0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.45■□□□□ 0.54
Defb28Q3V2L0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.45■□□□□ 0.54
Defb28Q3V2L0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Defb28Q3V2L0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.45■□□□□ 0.54
Defb28Q3V2L0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Defb28Q3V2L0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Defb28Q3V2L0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Defb28Q3V2L0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Defb28Q3V2L0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.44■□□□□ 0.54
Defb28Q3V2L0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms