Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Trim80Q3V061 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.62■□□□□ 0.73
Trim80Q3V061 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim80Q3V061 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim80Q3V061 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim80Q3V061 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.61■□□□□ 0.73
Trim80Q3V061 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim80Q3V061 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim80Q3V061 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim80Q3V061 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim80Q3V061 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim80Q3V061 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim80Q3V061 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim80Q3V061 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim80Q3V061 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim80Q3V061 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim80Q3V061 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim80Q3V061 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim80Q3V061 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim80Q3V061 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim80Q3V061 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim80Q3V061 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Trim80Q3V061 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim80Q3V061 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim80Q3V061 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Trim80Q3V061 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim80Q3V061 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim80Q3V061 Gm8495-201ENSMUST00000188740 694 ntBASIC19.58■□□□□ 0.72
Trim80Q3V061 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.58■□□□□ 0.72
Trim80Q3V061 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim80Q3V061 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim80Q3V061 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim80Q3V061 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim80Q3V061 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim80Q3V061 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim80Q3V061 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim80Q3V061 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim80Q3V061 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim80Q3V061 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trim80Q3V061 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim80Q3V061 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim80Q3V061 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim80Q3V061 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim80Q3V061 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Trim80Q3V061 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim80Q3V061 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim80Q3V061 Grk6-206ENSMUST00000224995 2971 ntBASIC19.57■□□□□ 0.72
Trim80Q3V061 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim80Q3V061 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim80Q3V061 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.56■□□□□ 0.72
Trim80Q3V061 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Trim80Q3V061 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.56■□□□□ 0.72
Trim80Q3V061 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim80Q3V061 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim80Q3V061 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim80Q3V061 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim80Q3V061 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim80Q3V061 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms