Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1d1Q3UV55 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Grk6-206ENSMUST00000224995 2971 ntBASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.06■□□□□ 0.8
Nr1d1Q3UV55 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1d1Q3UV55 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nr1d1Q3UV55 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
Nr1d1Q3UV55 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.02■□□□□ 0.8
Nr1d1Q3UV55 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1d1Q3UV55 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1d1Q3UV55 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.02■□□□□ 0.8
Nr1d1Q3UV55 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1d1Q3UV55 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Nr1d1Q3UV55 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nr1d1Q3UV55 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nr1d1Q3UV55 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1d1Q3UV55 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20■□□□□ 0.79
Nr1d1Q3UV55 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1d1Q3UV55 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20■□□□□ 0.79
Nr1d1Q3UV55 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms