Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam196aQ3USH1 Gm7367-201ENSMUST00000057611 492 ntBASIC19.33■□□□□ 0.68
Fam196aQ3USH1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam196aQ3USH1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam196aQ3USH1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam196aQ3USH1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Gm2399-201ENSMUST00000104944 225 ntBASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Mir5122-201ENSMUST00000175004 89 ntBASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Fam196aQ3USH1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam196aQ3USH1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Fam196aQ3USH1 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.31■□□□□ 0.68
Fam196aQ3USH1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Fam196aQ3USH1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.31■□□□□ 0.68
Fam196aQ3USH1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam196aQ3USH1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Fam196aQ3USH1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.31■□□□□ 0.68
Fam196aQ3USH1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam196aQ3USH1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Fam196aQ3USH1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Gm5417-201ENSMUST00000079706 384 ntBASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam196aQ3USH1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Fam196aQ3USH1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam196aQ3USH1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Fam196aQ3USH1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam196aQ3USH1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Fam196aQ3USH1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.29■□□□□ 0.68
Fam196aQ3USH1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam196aQ3USH1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam196aQ3USH1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.28■□□□□ 0.68
Fam196aQ3USH1 AA386476-201ENSMUST00000098781 1665 ntBASIC19.28■□□□□ 0.68
Fam196aQ3USH1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Gm13158-201ENSMUST00000122007 736 ntBASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam196aQ3USH1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Gm27741-201ENSMUST00000185060 237 ntBASIC19.27■□□□□ 0.68
Fam196aQ3USH1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam196aQ3USH1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fam196aQ3USH1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fam196aQ3USH1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fam196aQ3USH1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fam196aQ3USH1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam196aQ3USH1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam196aQ3USH1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam196aQ3USH1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam196aQ3USH1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam196aQ3USH1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.24■□□□□ 0.67
Fam196aQ3USH1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.24■□□□□ 0.67
Fam196aQ3USH1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.24■□□□□ 0.67
Fam196aQ3USH1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam196aQ3USH1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fam196aQ3USH1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms