Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsmem1Q3UQS2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsmem1Q3UQS2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Lsmem1Q3UQS2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsmem1Q3UQS2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Lsmem1Q3UQS2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Gm5874-201ENSMUST00000096101 508 ntBASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsmem1Q3UQS2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsmem1Q3UQS2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lsmem1Q3UQS2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsmem1Q3UQS2 Gm13234-201ENSMUST00000120010 747 ntBASIC19.44■□□□□ 0.7
Lsmem1Q3UQS2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsmem1Q3UQS2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lsmem1Q3UQS2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.44■□□□□ 0.7
Lsmem1Q3UQS2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.44■□□□□ 0.7
Lsmem1Q3UQS2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsmem1Q3UQS2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsmem1Q3UQS2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.43■□□□□ 0.7
Lsmem1Q3UQS2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsmem1Q3UQS2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsmem1Q3UQS2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsmem1Q3UQS2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsmem1Q3UQS2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsmem1Q3UQS2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsmem1Q3UQS2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsmem1Q3UQS2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Lsmem1Q3UQS2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lsmem1Q3UQS2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Lsmem1Q3UQS2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lsmem1Q3UQS2 Gm13146-201ENSMUST00000118508 780 ntBASIC19.42■□□□□ 0.7
Lsmem1Q3UQS2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.42■□□□□ 0.7
Lsmem1Q3UQS2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsmem1Q3UQS2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Gm8495-201ENSMUST00000188740 694 ntBASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Gm42778-201ENSMUST00000199644 553 ntBASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsmem1Q3UQS2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lsmem1Q3UQS2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 Gm42642-201ENSMUST00000200683 355 ntBASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 Gm10033-202ENSMUST00000211874 928 ntBASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.39■□□□□ 0.69
Lsmem1Q3UQS2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsmem1Q3UQS2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.38■□□□□ 0.69
Lsmem1Q3UQS2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsmem1Q3UQS2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsmem1Q3UQS2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lsmem1Q3UQS2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.37■□□□□ 0.69
Lsmem1Q3UQS2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsmem1Q3UQS2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsmem1Q3UQS2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsmem1Q3UQS2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsmem1Q3UQS2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsmem1Q3UQS2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsmem1Q3UQS2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms