Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smcr8Q3UMB5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smcr8Q3UMB5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smcr8Q3UMB5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Smcr8Q3UMB5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Smcr8Q3UMB5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.53■□□□□ 0.88
Smcr8Q3UMB5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smcr8Q3UMB5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smcr8Q3UMB5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smcr8Q3UMB5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Gm13146-201ENSMUST00000118508 780 ntBASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Smcr8Q3UMB5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Smcr8Q3UMB5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smcr8Q3UMB5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smcr8Q3UMB5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smcr8Q3UMB5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smcr8Q3UMB5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smcr8Q3UMB5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.51■□□□□ 0.87
Smcr8Q3UMB5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smcr8Q3UMB5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Smcr8Q3UMB5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 Golph3-202ENSMUST00000226517 2359 ntBASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smcr8Q3UMB5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Gm27011-201ENSMUST00000182352 972 ntBASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smcr8Q3UMB5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 Mir5133-201ENSMUST00000174955 77 ntBASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smcr8Q3UMB5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.47■□□□□ 0.87
Smcr8Q3UMB5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Smcr8Q3UMB5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms