Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Gm27011-201ENSMUST00000182352 972 ntBASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx27Q3UHD6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx27Q3UHD6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Snx27Q3UHD6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx27Q3UHD6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx27Q3UHD6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx27Q3UHD6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.72■□□□□ 0.91
Snx27Q3UHD6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx27Q3UHD6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Snx27Q3UHD6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx27Q3UHD6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx27Q3UHD6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Snx27Q3UHD6 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.71■□□□□ 0.91
Snx27Q3UHD6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snx27Q3UHD6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Snx27Q3UHD6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Snx27Q3UHD6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snx27Q3UHD6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Snx27Q3UHD6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Snx27Q3UHD6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Snx27Q3UHD6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Gm6211-202ENSMUST00000167849 925 ntBASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx27Q3UHD6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Snx27Q3UHD6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Snx27Q3UHD6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Snx27Q3UHD6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx27Q3UHD6 Gm4968-201ENSMUST00000071458 858 ntBASIC20.67■□□□□ 0.9
Snx27Q3UHD6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx27Q3UHD6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snx27Q3UHD6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx27Q3UHD6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Snx27Q3UHD6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms