Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Spg11Q3UHA3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Spg11Q3UHA3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Spg11Q3UHA3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Spg11Q3UHA3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Spg11Q3UHA3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.88■□□□□ 0.45
Spg11Q3UHA3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Spg11Q3UHA3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Spg11Q3UHA3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Spg11Q3UHA3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Spg11Q3UHA3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Spg11Q3UHA3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Spg11Q3UHA3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Spg11Q3UHA3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Spg11Q3UHA3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Gm7284-201ENSMUST00000131667 944 ntBASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Spg11Q3UHA3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Spg11Q3UHA3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Spg11Q3UHA3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Spg11Q3UHA3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.84■□□□□ 0.45
Spg11Q3UHA3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Spg11Q3UHA3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Spg11Q3UHA3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Spg11Q3UHA3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Spg11Q3UHA3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Spg11Q3UHA3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Spg11Q3UHA3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Spg11Q3UHA3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Spg11Q3UHA3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Spg11Q3UHA3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Spg11Q3UHA3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Gm18032-201ENSMUST00000222541 538 ntBASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Odf3b-204ENSMUST00000227834 930 ntBASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Spg11Q3UHA3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Spg11Q3UHA3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Spg11Q3UHA3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Spg11Q3UHA3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.81■□□□□ 0.44
Spg11Q3UHA3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Spg11Q3UHA3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Spg11Q3UHA3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Spg11Q3UHA3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Spg11Q3UHA3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Spg11Q3UHA3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Gm28033-201ENSMUST00000184224 96 ntBASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Spg11Q3UHA3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms