Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Xrra1Q3U3V8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Xrra1Q3U3V8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrra1Q3U3V8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrra1Q3U3V8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 AA386476-201ENSMUST00000098781 1665 ntBASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Xrra1Q3U3V8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrra1Q3U3V8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrra1Q3U3V8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrra1Q3U3V8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrra1Q3U3V8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.21■□□□□ 0.51
Xrra1Q3U3V8 Gm40848-201ENSMUST00000221998 324 ntBASIC18.21■□□□□ 0.51
Xrra1Q3U3V8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Xrra1Q3U3V8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Xrra1Q3U3V8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Xrra1Q3U3V8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Xrra1Q3U3V8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xrra1Q3U3V8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.19■□□□□ 0.5
Xrra1Q3U3V8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Xrra1Q3U3V8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Xrra1Q3U3V8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrra1Q3U3V8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Xrra1Q3U3V8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Xrra1Q3U3V8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.18■□□□□ 0.5
Xrra1Q3U3V8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xrra1Q3U3V8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Xrra1Q3U3V8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Xrra1Q3U3V8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Xrra1Q3U3V8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Xrra1Q3U3V8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Xrra1Q3U3V8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Xrra1Q3U3V8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Xrra1Q3U3V8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms