Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Gm7514-201ENSMUST00000209475 934 ntBASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1lQ3TTP0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1lQ3TTP0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1lQ3TTP0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1lQ3TTP0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Gm12933-201ENSMUST00000120203 872 ntBASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
Shcbp1lQ3TTP0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Gm13146-201ENSMUST00000118508 780 ntBASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Gm38205-201ENSMUST00000192243 258 ntBASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shcbp1lQ3TTP0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shcbp1lQ3TTP0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shcbp1lQ3TTP0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shcbp1lQ3TTP0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Shcbp1lQ3TTP0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.16■□□□□ 0.66
Shcbp1lQ3TTP0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms