Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim7Q3TJD7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim7Q3TJD7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim7Q3TJD7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim7Q3TJD7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim7Q3TJD7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim7Q3TJD7 Gm715-201ENSMUST00000117865 831 ntBASIC21.66■■□□□ 1.06
Pdlim7Q3TJD7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim7Q3TJD7 AA386476-201ENSMUST00000098781 1665 ntBASIC21.66■■□□□ 1.06
Pdlim7Q3TJD7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim7Q3TJD7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pdlim7Q3TJD7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim7Q3TJD7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim7Q3TJD7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pdlim7Q3TJD7 Gm7860-201ENSMUST00000121190 879 ntBASIC21.65■■□□□ 1.06
Pdlim7Q3TJD7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim7Q3TJD7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pdlim7Q3TJD7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim7Q3TJD7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pdlim7Q3TJD7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.64■■□□□ 1.05
Pdlim7Q3TJD7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim7Q3TJD7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim7Q3TJD7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.64■■□□□ 1.05
Pdlim7Q3TJD7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pdlim7Q3TJD7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim7Q3TJD7 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.64■■□□□ 1.05
Pdlim7Q3TJD7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim7Q3TJD7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim7Q3TJD7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim7Q3TJD7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim7Q3TJD7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim7Q3TJD7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim7Q3TJD7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.63■■□□□ 1.05
Pdlim7Q3TJD7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pdlim7Q3TJD7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pdlim7Q3TJD7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pdlim7Q3TJD7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim7Q3TJD7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim7Q3TJD7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim7Q3TJD7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.62■■□□□ 1.05
Pdlim7Q3TJD7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pdlim7Q3TJD7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim7Q3TJD7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim7Q3TJD7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pdlim7Q3TJD7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pdlim7Q3TJD7 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.61■■□□□ 1.05
Pdlim7Q3TJD7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim7Q3TJD7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.6■■□□□ 1.05
Pdlim7Q3TJD7 Gm2559-201ENSMUST00000201323 363 ntBASIC21.6■■□□□ 1.05
Pdlim7Q3TJD7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim7Q3TJD7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim7Q3TJD7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.6■■□□□ 1.05
Pdlim7Q3TJD7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pdlim7Q3TJD7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pdlim7Q3TJD7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pdlim7Q3TJD7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pdlim7Q3TJD7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.58■■□□□ 1.05
Pdlim7Q3TJD7 Gm15565-201ENSMUST00000118890 427 ntBASIC21.58■■□□□ 1.05
Pdlim7Q3TJD7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.58■■□□□ 1.05
Pdlim7Q3TJD7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Pdlim7Q3TJD7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pdlim7Q3TJD7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pdlim7Q3TJD7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pdlim7Q3TJD7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim7Q3TJD7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim7Q3TJD7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms