Protein–RNA interactions for Protein: Q32KG4

Rtl9, Retrotransposon Gag-like protein 9, mousemouse

Predictions only

Length 1,339 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl9Q32KG4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Rtl9Q32KG4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl9Q32KG4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.27■□□□□ 0.84
Rtl9Q32KG4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl9Q32KG4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rtl9Q32KG4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Rtl9Q32KG4 Reep4-203ENSMUST00000226563 1444 ntBASIC20.27■□□□□ 0.84
Rtl9Q32KG4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.27■□□□□ 0.83
Rtl9Q32KG4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Gm13234-201ENSMUST00000120010 747 ntBASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rtl9Q32KG4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl9Q32KG4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtl9Q32KG4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtl9Q32KG4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl9Q32KG4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl9Q32KG4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl9Q32KG4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl9Q32KG4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rtl9Q32KG4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl9Q32KG4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl9Q32KG4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl9Q32KG4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.21■□□□□ 0.83
Rtl9Q32KG4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl9Q32KG4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl9Q32KG4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl9Q32KG4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl9Q32KG4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl9Q32KG4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.2■□□□□ 0.82
Rtl9Q32KG4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl9Q32KG4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rtl9Q32KG4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rtl9Q32KG4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl9Q32KG4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl9Q32KG4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms