Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim72Q1XH17 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim72Q1XH17 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim72Q1XH17 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim72Q1XH17 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim72Q1XH17 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim72Q1XH17 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim72Q1XH17 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim72Q1XH17 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.41■□□□□ 0.86
Trim72Q1XH17 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Trim72Q1XH17 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim72Q1XH17 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim72Q1XH17 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim72Q1XH17 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim72Q1XH17 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim72Q1XH17 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Trim72Q1XH17 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim72Q1XH17 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim72Q1XH17 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim72Q1XH17 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Trim72Q1XH17 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Trim72Q1XH17 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim72Q1XH17 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
Trim72Q1XH17 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim72Q1XH17 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim72Q1XH17 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim72Q1XH17 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim72Q1XH17 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim72Q1XH17 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trim72Q1XH17 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Trim72Q1XH17 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim72Q1XH17 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.38■□□□□ 0.85
Trim72Q1XH17 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.38■□□□□ 0.85
Trim72Q1XH17 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.38■□□□□ 0.85
Trim72Q1XH17 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim72Q1XH17 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim72Q1XH17 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim72Q1XH17 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim72Q1XH17 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim72Q1XH17 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim72Q1XH17 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Trim72Q1XH17 Gm7860-201ENSMUST00000121190 879 ntBASIC20.37■□□□□ 0.85
Trim72Q1XH17 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim72Q1XH17 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim72Q1XH17 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim72Q1XH17 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim72Q1XH17 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim72Q1XH17 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim72Q1XH17 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim72Q1XH17 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim72Q1XH17 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim72Q1XH17 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim72Q1XH17 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Trim72Q1XH17 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.35■□□□□ 0.85
Trim72Q1XH17 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim72Q1XH17 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim72Q1XH17 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim72Q1XH17 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trim72Q1XH17 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.34■□□□□ 0.85
Trim72Q1XH17 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.34■□□□□ 0.85
Trim72Q1XH17 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim72Q1XH17 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trim72Q1XH17 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim72Q1XH17 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim72Q1XH17 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Trim72Q1XH17 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim72Q1XH17 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim72Q1XH17 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim72Q1XH17 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim72Q1XH17 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.32■□□□□ 0.84
Trim72Q1XH17 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim72Q1XH17 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim72Q1XH17 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim72Q1XH17 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.32■□□□□ 0.84
Trim72Q1XH17 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.32■□□□□ 0.84
Trim72Q1XH17 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim72Q1XH17 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms