Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Shc1P98083 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Shc1P98083 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shc1P98083 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shc1P98083 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Shc1P98083 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.17■□□□□ 0.34
Shc1P98083 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.17■□□□□ 0.34
Shc1P98083 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.17■□□□□ 0.34
Shc1P98083 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.17■□□□□ 0.34
Shc1P98083 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shc1P98083 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shc1P98083 Reep4-203ENSMUST00000226563 1444 ntBASIC17.17■□□□□ 0.34
Shc1P98083 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Shc1P98083 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shc1P98083 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.17■□□□□ 0.34
Shc1P98083 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shc1P98083 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.17■□□□□ 0.34
Shc1P98083 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shc1P98083 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Shc1P98083 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.16■□□□□ 0.34
Shc1P98083 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.16■□□□□ 0.34
Shc1P98083 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Shc1P98083 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shc1P98083 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shc1P98083 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Shc1P98083 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.15■□□□□ 0.34
Shc1P98083 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shc1P98083 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.15■□□□□ 0.34
Shc1P98083 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shc1P98083 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shc1P98083 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shc1P98083 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shc1P98083 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shc1P98083 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Shc1P98083 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.15■□□□□ 0.34
Shc1P98083 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shc1P98083 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Shc1P98083 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shc1P98083 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shc1P98083 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shc1P98083 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shc1P98083 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shc1P98083 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shc1P98083 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Shc1P98083 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shc1P98083 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shc1P98083 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc1P98083 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shc1P98083 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc1P98083 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc1P98083 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.13■□□□□ 0.33
Shc1P98083 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
Shc1P98083 Gm8495-201ENSMUST00000188740 694 ntBASIC17.13■□□□□ 0.33
Shc1P98083 Gm38205-201ENSMUST00000192243 258 ntBASIC17.13■□□□□ 0.33
Shc1P98083 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc1P98083 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc1P98083 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc1P98083 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc1P98083 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc1P98083 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shc1P98083 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.12■□□□□ 0.33
Shc1P98083 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.12■□□□□ 0.33
Shc1P98083 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.12■□□□□ 0.33
Shc1P98083 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shc1P98083 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc1P98083 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc1P98083 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shc1P98083 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shc1P98083 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Shc1P98083 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.11■□□□□ 0.33
Shc1P98083 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc1P98083 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc1P98083 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.11■□□□□ 0.33
Shc1P98083 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.11■□□□□ 0.33
Shc1P98083 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc1P98083 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc1P98083 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc1P98083 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc1P98083 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.11■□□□□ 0.33
Shc1P98083 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shc1P98083 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Shc1P98083 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.1■□□□□ 0.33
Shc1P98083 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc1P98083 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc1P98083 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Shc1P98083 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc1P98083 Gm26571-201ENSMUST00000181399 666 ntBASIC17.1■□□□□ 0.33
Shc1P98083 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms