Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Smad5P97454 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad5P97454 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smad5P97454 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smad5P97454 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad5P97454 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad5P97454 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad5P97454 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad5P97454 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smad5P97454 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.12■□□□□ 0.49
Smad5P97454 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.12■□□□□ 0.49
Smad5P97454 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smad5P97454 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smad5P97454 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smad5P97454 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smad5P97454 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smad5P97454 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smad5P97454 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.11■□□□□ 0.49
Smad5P97454 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Smad5P97454 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.11■□□□□ 0.49
Smad5P97454 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Smad5P97454 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smad5P97454 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad5P97454 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Smad5P97454 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.1■□□□□ 0.49
Smad5P97454 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.1■□□□□ 0.49
Smad5P97454 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Smad5P97454 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smad5P97454 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad5P97454 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.09■□□□□ 0.49
Smad5P97454 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Smad5P97454 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.09■□□□□ 0.49
Smad5P97454 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smad5P97454 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.09■□□□□ 0.49
Smad5P97454 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.09■□□□□ 0.49
Smad5P97454 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smad5P97454 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smad5P97454 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smad5P97454 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smad5P97454 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smad5P97454 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smad5P97454 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smad5P97454 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smad5P97454 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smad5P97454 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.08■□□□□ 0.48
Smad5P97454 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smad5P97454 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smad5P97454 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smad5P97454 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smad5P97454 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
Smad5P97454 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smad5P97454 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.07■□□□□ 0.48
Smad5P97454 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.07■□□□□ 0.48
Smad5P97454 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smad5P97454 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms