Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps45P97390 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Vps45P97390 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps45P97390 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps45P97390 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps45P97390 Gm12933-201ENSMUST00000120203 872 ntBASIC19.75■□□□□ 0.75
Vps45P97390 Gm11421-201ENSMUST00000122124 294 ntBASIC19.75■□□□□ 0.75
Vps45P97390 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.75■□□□□ 0.75
Vps45P97390 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps45P97390 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.75■□□□□ 0.75
Vps45P97390 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps45P97390 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps45P97390 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.74■□□□□ 0.75
Vps45P97390 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps45P97390 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps45P97390 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps45P97390 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.74■□□□□ 0.75
Vps45P97390 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps45P97390 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vps45P97390 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps45P97390 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps45P97390 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps45P97390 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps45P97390 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps45P97390 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vps45P97390 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps45P97390 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.73■□□□□ 0.75
Vps45P97390 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps45P97390 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps45P97390 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps45P97390 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps45P97390 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps45P97390 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps45P97390 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.73■□□□□ 0.75
Vps45P97390 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.73■□□□□ 0.75
Vps45P97390 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps45P97390 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Vps45P97390 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps45P97390 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps45P97390 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps45P97390 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Vps45P97390 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.72■□□□□ 0.75
Vps45P97390 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.72■□□□□ 0.75
Vps45P97390 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.72■□□□□ 0.75
Vps45P97390 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.72■□□□□ 0.75
Vps45P97390 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps45P97390 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps45P97390 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps45P97390 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps45P97390 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps45P97390 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.71■□□□□ 0.75
Vps45P97390 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vps45P97390 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps45P97390 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vps45P97390 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vps45P97390 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.71■□□□□ 0.75
Vps45P97390 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Vps45P97390 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vps45P97390 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.71■□□□□ 0.75
Vps45P97390 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.71■□□□□ 0.75
Vps45P97390 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps45P97390 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps45P97390 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vps45P97390 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps45P97390 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps45P97390 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps45P97390 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Vps45P97390 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Vps45P97390 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps45P97390 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps45P97390 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.69■□□□□ 0.74
Vps45P97390 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vps45P97390 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps45P97390 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps45P97390 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps45P97390 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps45P97390 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.68■□□□□ 0.74
Vps45P97390 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Vps45P97390 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.68■□□□□ 0.74
Vps45P97390 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps45P97390 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.68■□□□□ 0.74
Vps45P97390 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps45P97390 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps45P97390 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps45P97390 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps45P97390 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps45P97390 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps45P97390 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.68■□□□□ 0.74
Vps45P97390 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.68■□□□□ 0.74
Vps45P97390 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Vps45P97390 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms