Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
PrkdcP97313 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PrkdcP97313 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.37□□□□□ -0.27
PrkdcP97313 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrkdcP97313 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrkdcP97313 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.37□□□□□ -0.27
PrkdcP97313 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.37□□□□□ -0.27
PrkdcP97313 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrkdcP97313 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PrkdcP97313 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.36□□□□□ -0.27
PrkdcP97313 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrkdcP97313 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrkdcP97313 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrkdcP97313 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PrkdcP97313 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PrkdcP97313 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrkdcP97313 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrkdcP97313 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PrkdcP97313 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrkdcP97313 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrkdcP97313 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrkdcP97313 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrkdcP97313 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrkdcP97313 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrkdcP97313 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
PrkdcP97313 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PrkdcP97313 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
PrkdcP97313 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Gm23634-201ENSMUST00000175071 91 ntBASIC13.34□□□□□ -0.27
PrkdcP97313 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Gm37415-201ENSMUST00000192265 2054 ntBASIC13.34□□□□□ -0.27
PrkdcP97313 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.34□□□□□ -0.27
PrkdcP97313 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.34□□□□□ -0.27
PrkdcP97313 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrkdcP97313 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
PrkdcP97313 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
PrkdcP97313 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PrkdcP97313 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.33□□□□□ -0.28
PrkdcP97313 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkdcP97313 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkdcP97313 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkdcP97313 Gm13559-201ENSMUST00000120476 863 ntBASIC13.33□□□□□ -0.28
PrkdcP97313 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.33□□□□□ -0.28
PrkdcP97313 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkdcP97313 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkdcP97313 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
PrkdcP97313 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PrkdcP97313 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkdcP97313 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkdcP97313 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkdcP97313 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkdcP97313 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkdcP97313 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.32□□□□□ -0.28
PrkdcP97313 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkdcP97313 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
PrkdcP97313 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PrkdcP97313 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PrkdcP97313 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.32□□□□□ -0.28
PrkdcP97313 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkdcP97313 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.31□□□□□ -0.28
PrkdcP97313 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PrkdcP97313 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.31□□□□□ -0.28
PrkdcP97313 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.31□□□□□ -0.28
PrkdcP97313 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkdcP97313 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC13.3□□□□□ -0.28
PrkdcP97313 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PrkdcP97313 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.3□□□□□ -0.28
PrkdcP97313 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkdcP97313 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PrkdcP97313 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PrkdcP97313 Gm18101-201ENSMUST00000215769 548 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms