Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm10849-201ENSMUST00000100397 618 ntBASIC19.28■□□□□ 0.68
ThraP63058 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ThraP63058 Gm27405-201ENSMUST00000184201 112 ntBASIC19.28■□□□□ 0.68
ThraP63058 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.28■□□□□ 0.68
ThraP63058 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.28■□□□□ 0.68
ThraP63058 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ThraP63058 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ThraP63058 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ThraP63058 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ThraP63058 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ThraP63058 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ThraP63058 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ThraP63058 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ThraP63058 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ThraP63058 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ThraP63058 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ThraP63058 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
ThraP63058 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ThraP63058 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ThraP63058 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.27■□□□□ 0.68
ThraP63058 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ThraP63058 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ThraP63058 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ThraP63058 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ThraP63058 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ThraP63058 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ThraP63058 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ThraP63058 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.26■□□□□ 0.67
ThraP63058 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ThraP63058 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ThraP63058 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ThraP63058 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ThraP63058 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ThraP63058 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ThraP63058 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ThraP63058 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ThraP63058 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ThraP63058 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ThraP63058 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.25■□□□□ 0.67
ThraP63058 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ThraP63058 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ThraP63058 Gm11421-201ENSMUST00000122124 294 ntBASIC19.24■□□□□ 0.67
ThraP63058 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ThraP63058 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ThraP63058 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ThraP63058 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ThraP63058 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ThraP63058 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ThraP63058 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ThraP63058 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.23■□□□□ 0.67
ThraP63058 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ThraP63058 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ThraP63058 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ThraP63058 Mir6236-201ENSMUST00000184437 123 ntBASIC19.23■□□□□ 0.67
ThraP63058 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ThraP63058 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
ThraP63058 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ThraP63058 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ThraP63058 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ThraP63058 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ThraP63058 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ThraP63058 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.22■□□□□ 0.67
ThraP63058 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ThraP63058 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ThraP63058 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.21■□□□□ 0.67
ThraP63058 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.21■□□□□ 0.67
ThraP63058 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ThraP63058 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ThraP63058 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ThraP63058 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ThraP63058 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ThraP63058 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.2■□□□□ 0.66
ThraP63058 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ThraP63058 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ThraP63058 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ThraP63058 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ThraP63058 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ThraP63058 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.2■□□□□ 0.66
ThraP63058 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ThraP63058 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ThraP63058 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.19■□□□□ 0.66
ThraP63058 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.19■□□□□ 0.66
ThraP63058 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ThraP63058 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ThraP63058 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ThraP63058 Gm18671-201ENSMUST00000214826 683 ntBASIC19.19■□□□□ 0.66
ThraP63058 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ThraP63058 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ThraP63058 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ThraP63058 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms