Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.64□□□□□ -0.23
Rpl39P62892 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.64□□□□□ -0.23
Rpl39P62892 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Rpl39P62892 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Grk6-206ENSMUST00000224995 2971 ntBASIC13.64□□□□□ -0.23
Rpl39P62892 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl39P62892 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rpl39P62892 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl39P62892 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl39P62892 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl39P62892 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl39P62892 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl39P62892 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl39P62892 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl39P62892 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl39P62892 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rpl39P62892 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpl39P62892 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.62□□□□□ -0.23
Rpl39P62892 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.62□□□□□ -0.23
Rpl39P62892 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpl39P62892 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.62□□□□□ -0.23
Rpl39P62892 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl39P62892 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rpl39P62892 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rpl39P62892 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rpl39P62892 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpl39P62892 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC13.61□□□□□ -0.23
Rpl39P62892 Gm43530-201ENSMUST00000195920 274 ntBASIC13.61□□□□□ -0.23
Rpl39P62892 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl39P62892 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpl39P62892 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpl39P62892 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 AA386476-201ENSMUST00000098781 1665 ntBASIC13.6□□□□□ -0.23
Rpl39P62892 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rpl39P62892 Gm43566-201ENSMUST00000196851 808 ntBASIC13.6□□□□□ -0.23
Rpl39P62892 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rpl39P62892 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Rpl39P62892 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpl39P62892 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl39P62892 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl39P62892 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl39P62892 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rpl39P62892 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.59□□□□□ -0.23
Rpl39P62892 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl39P62892 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl39P62892 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.59□□□□□ -0.23
Rpl39P62892 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rpl39P62892 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.59□□□□□ -0.23
Rpl39P62892 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms