Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rps28P62858 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rps28P62858 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rps28P62858 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rps28P62858 BC021767-201ENSMUST00000126387 1716 ntBASIC11.46□□□□□ -0.58
Rps28P62858 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rps28P62858 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC11.46□□□□□ -0.58
Rps28P62858 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rps28P62858 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rps28P62858 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rps28P62858 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Rps28P62858 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC11.45□□□□□ -0.58
Rps28P62858 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC11.45□□□□□ -0.58
Rps28P62858 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rps28P62858 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC11.45□□□□□ -0.58
Rps28P62858 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rps28P62858 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rps28P62858 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC11.44□□□□□ -0.58
Rps28P62858 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rps28P62858 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC11.44□□□□□ -0.58
Rps28P62858 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Rps28P62858 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rps28P62858 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rps28P62858 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rps28P62858 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rps28P62858 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Rps28P62858 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rps28P62858 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Rps28P62858 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rps28P62858 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rps28P62858 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.43□□□□□ -0.58
Rps28P62858 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC11.43□□□□□ -0.58
Rps28P62858 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rps28P62858 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC11.43□□□□□ -0.58
Rps28P62858 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rps28P62858 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rps28P62858 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rps28P62858 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rps28P62858 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rps28P62858 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rps28P62858 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rps28P62858 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rps28P62858 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rps28P62858 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rps28P62858 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms