Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.98■□□□□ 0.31
Sf3b6P59708 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.98■□□□□ 0.31
Sf3b6P59708 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sf3b6P59708 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.98■□□□□ 0.31
Sf3b6P59708 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sf3b6P59708 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sf3b6P59708 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3b6P59708 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.98■□□□□ 0.31
Sf3b6P59708 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sf3b6P59708 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.97■□□□□ 0.31
Sf3b6P59708 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.97■□□□□ 0.31
Sf3b6P59708 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.97■□□□□ 0.31
Sf3b6P59708 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3b6P59708 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3b6P59708 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Sf3b6P59708 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3b6P59708 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3b6P59708 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3b6P59708 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3b6P59708 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.96■□□□□ 0.31
Sf3b6P59708 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3b6P59708 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.96■□□□□ 0.31
Sf3b6P59708 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.96■□□□□ 0.31
Sf3b6P59708 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3b6P59708 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Sf3b6P59708 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sf3b6P59708 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.96■□□□□ 0.3
Sf3b6P59708 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Sf3b6P59708 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3b6P59708 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3b6P59708 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Sf3b6P59708 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.95■□□□□ 0.3
Sf3b6P59708 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3b6P59708 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3b6P59708 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Sf3b6P59708 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b6P59708 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b6P59708 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.94■□□□□ 0.3
Sf3b6P59708 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sf3b6P59708 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.94■□□□□ 0.3
Sf3b6P59708 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b6P59708 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.94■□□□□ 0.3
Sf3b6P59708 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b6P59708 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b6P59708 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.94■□□□□ 0.3
Sf3b6P59708 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b6P59708 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b6P59708 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.94■□□□□ 0.3
Sf3b6P59708 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sf3b6P59708 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b6P59708 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b6P59708 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b6P59708 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b6P59708 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Sf3b6P59708 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.93■□□□□ 0.3
Sf3b6P59708 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.93■□□□□ 0.3
Sf3b6P59708 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b6P59708 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.93■□□□□ 0.3
Sf3b6P59708 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b6P59708 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b6P59708 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b6P59708 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b6P59708 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b6P59708 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.92■□□□□ 0.3
Sf3b6P59708 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.92■□□□□ 0.3
Sf3b6P59708 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.92■□□□□ 0.3
Sf3b6P59708 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b6P59708 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b6P59708 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b6P59708 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b6P59708 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b6P59708 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Sf3b6P59708 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.91■□□□□ 0.3
Sf3b6P59708 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms